Archive for the ‘Science’ category
Pigasus Awards 2010
April 6th, 2010The Evolution of Dogs
March 30th, 2010
I just finished a fascinating read about the evolution of dogs over at the ScienceBlog Observations of a Nerd. Having read quite a bit about evolution including Darwin’s founding work, I found the discussion of dogs very interesting. Darwin spent significant time on the subject of domesticated animals in On The Origin of Species. He was wrong about the fact that dogs originated from multiple species, but fortunately he was right about everything else.
Observations of a Nerd tells a fascinating story about the evolution of wild dogs in Moscow. Apparently they have evolved into four general breeds of dogs with specific traits. This highlights how extreme conditions can accelerate the normally slow pace we associate with evolution.
Apollo 13 Failure Scenario
March 26th, 2010Here is a cool simulation of what would have occurred to Apollo 13 had they not corrected course.
DNA, RNA, Nanotechnology and Cancer
March 24th, 2010The true nature of DNA was discovered in 1953 by James D. Watson and Francis Crick, two giants of the scientific world. Crick, who also did work in physics and and neuroscience, established the central model of how DNA “controls” the cell, or what has become known as the Central Dogma of molecular biology. The general idea is that DNA makes RNA, and RNA makes protein, and protein interacts with any number of processes in the cell. The model has been refined over the years, but the core tenets still stand.
An important part of the DNA <-> RNA -> Protein model is RNAi, or RNA interference. RNA provides a couple of mechanisms that allow interference of what parts of the DNA (genes) are being expressed (turned-on) in a cell, and to what extent those that are turned on influence cellular processes. RNAi is important in the development and day-to-day (or minute-to-minute) running of a cell. It is also an important mechanism for fighting off viruses and other invaders of the cell.
Because RNAi can be used to turn-down or turn-off functions in the cell, it has long been seen as a possible weapon against disease. For example, cancer cells could be targeted with RNAi from outside the cell and reproduction or mutation could be halted. In this way cancer cells could be killed. This same technique could be used to guard against viruses and other genetic pirates of the molecular biology world.
One problem with this approach has been the inability to correctly target only those cells that one wishes to affect.
Nanotechnology has a history filled with more speculation and hypothesis than experimental science and real use. However, in recent years nanotech and medicine have seen a couple of breakthroughs that might result in new therapies for disease. A breakthrough last year showed how gold nanoparticles can been used in conjunction with radiation to treat cancer. And now researches at CalTech have demonstrated nanobots that accurately deliver RNAi to melanoma cells (cancer). This type of chemical deliver has huge promise.
The fight against cancer has always been waged with blunt instruments. Chemotherapy attacks the cancer, but it also attacks healthy systems in the patient. The same is true of radiation treatments. Surgery is invasive and often ineffective. But the delivery of specific chemical compounds to very specific locations within the body (individual cells!) could see the battle against cancer and other diseases gaining a very precision weapon.
Sam Harris: Science can answer moral questions
March 22nd, 2010What If You’re Wrong?
March 2nd, 2010Staw Man
March 1st, 2010Science isn’t about the person, its about the theory and the evidence. Of course the people matter as they are the ones doing all the work, but at the end of the day our understanding of the universe and the natural world does not rely upon one person being right or wrong, but upon the evidence we find to support specific conclusions. The theory itself might be changed, by the original author or by many in the scientific community, to more closely agree with the data. This is a basic tenant of science. We judge the resulting product based on the evidence, not whether it conveniently falls into a religious or political ideology.
Image if Einstein decided to retract general relativity in the late 1920s, with no reason or evidence justifying this action. Imagine he simply decided that he no longer supported the idea. Surely that would have caused a great stir in the scientific world and particularly in the world of theoretical physics. However, the scientific community, in the end, would not have abandoned general relativity without proof it was wrong. They would have stood by the theory, since in the 1920s there was already a lot of proof that it was very right. We don’t need Einstein to agree that the theory is sound; we need evidence to agree that the idea is sound.
Similarly with evolution, Darwin doesn’t really matter other than the fact he first proposed it. What matters is not what aspects of his original theory are right or wrong, though the vast majority of Darwin’s original theory has survived the test of time and more than one revolution in biology. What Darwin said or did doesn’t change reality. The theory, backed with evidence, changes our perceptions. And that evidence is overwhelming in the cases of General Relativity and Evolution. An attack on Darwin, or Einstein, is just an attack on a person, not on all the evidence supporting their theories.
A belief in evolution is not a faith. Its based on the fact that evolution has been proven true by multiple, separate lines of evidence. Evolution, for all intents and purposes, is a scientific fact. It doesn’t matter what attacks might be made on the great man. Those attacks, or anything Darwin said or did, does not change the physical reality that all organisms have evolved to their current states via natural selection.
Book Review: How to Teach Physics to Your Dog
February 26th, 2010
I finished How to Teach Physics To Your Dog by Chad Orzel about a month ago, and have found myself thinking about it off and on during that time. For the difficult subject of Quantum Physics, Orzel does a very good job conveying unintuitive concepts so that a non-physicist might understand them. The book takes the format of Orzel teaching physics to his dog through many conversations that are often humorous and always lead to an in-depth discussion regarding Quantum Physics. Having read a few other books on Physics and at least one other book on Quantum Physics, I was familiar with several of the concepts. However, Orzel did a very good job diving into a level of detail that I had no previously seen, despite the accessibility of his writing style.
Quantum Physics flies in the face of common sense. Our brains evolved with macro cause and effect, with objects that are solid and act in a fashion that we expect. Particles at the quantum scale do not act solid, do not act in a fashion that our brain would expect, yet this science and been experimentally proven to a level that is only rivaled by the evidence for evolution or relativity.
One of my favorite sections of the book addresses quackery and popular misconceptions around quantum physics. Orzel does a good job comparing and contrasting the science with the misconceptions perpetrated by these quacks, and by the media.
I would highly recommend this book for anyone looking to learn more about Quantum Physics.
Book Review: In Search of Memory
February 25th, 2010
Every once in a while I read a book that is truly amazing, a book that leaves me thinking about it during those times of the day when my thoughts wander. Godel, Escher and Bach is such a book, as is The Singularity is Near. Last night I finished another such book, In Search of Memory: The Emergence of a New Science of the Mind by Eric R. Kandel. As you might expect from the title, the book is primarily concerned with the sciences related to the brain and in particular the science of memory. However, Dr. Kandel’s book not only is a wonderfully vivid discussion of neural science over the past century and a half, but a touching autobiography.
Kandel, winner of the 2000 Nobel Prize in Physiology or Medicine, was born a Jew, in Vienna, in 1929. At age 10 the Nazis “invaded” Austria, and within the year he found himself in America. Its is within the context of this start to life that he tells of his search for the biological basis of Freud’s theories, which ultimately leads him to the research of memory, many accolades, and an important place in medical and scientific history.
The science in the book is fascinating. Kandel himself is a pioneer in neural science, but he spends many pages in each chapter discussing the brilliant women and men with which he has worked, many of whom have also won The Nobel Prize. Kandel is a very talented writer, and exceptionally good at conveying complex scientific concepts to the lay reader. The science of the mind is surely the most difficult of all of the medical sciences, and Kandel goes into detail while leaving the book accessible to the non-scientist.
When Kandel speaks of his past, his relationship to Europe and Vienna, his friends, and his family, he is particularly candid and touching. The emotional depth of the book was surprising for me. The man is clearly passionate about many things, and those passions ring through true and clear in the book.
At the end of reading the book I found my understanding of brain biology much greater, but I also found that I had learned a new aspect of the history World War II. I also found that this man, who is obviously a talented scientist, is also Pulitzer-caliber author. His writing is of such that I would wonder if this book might have won The Pulitzer if not for its scientific depth.
I cannot recommend this book enough. It is one I am sure I will find myself revisiting in years to come.
